Round 1
| Position | BIB | Name | Team | Echelon | Mark | 
|---|---|---|---|---|---|
| 1 | 613 | Gonçalo Carvalho |  EACL | SUB-16 | 02:05.95 | 
| 2 | 618 | Paulo Lages |  GDC-VC | SUB-16 | 02:08.51 | 
| 3 | 620 | Santiago Fernandes |  GS | SUB-16 | 02:09.82 | 
| 4 | 622 | Rodrigo Azevedo |  MAC | SUB-16 | 02:12.21 | 
| 5 | 619 | João Pereira |  GDC-VC | SUB-16 | 02:21.84 | 
| 6 | 420 | Tiago Costa |  ACVSM | SUB-16 | 02:27.44 | 
| 7 | 611 | Rodrigo Pinto |  CDPRI | SUB-16 | 02:27.77 | 
| 8 | 616 | Tomás Pinto |  FCV | SUB-16 | 02:28.85 | 
| 9 | 418 | Dinis Ferreira |  GDC-VC | SUB-16 | 02:36.13 | 
| 10 | 623 | Leandro Ferreira |  SCB | SUB-16 | 02:36.21 | 
| 11 | 617 | Tomás Silva |  FCV | SUB-16 | 02:46.59 | 
| DNS | 621 | Dinis Sousa |  LFC-F | SUB-16 | x | 
| DNS | 615 | José Miranda |  EAROS | SUB-16 | x | 
| DNS | 614 | Tiago José Silva |  EAROS | SUB-16 | x | 
| DNS | 612 | Guilherme Martins |  CDPRI | SUB-16 | x | 
| DNS | 610 | Diogo Henoch |  CDPRI | SUB-16 | x | 
| DNS | 417 | Rodrigo Meira |  GDC-VC | SUB-16 | x |